
What is the method to examine atomic bonds and hydrogen …
May 1, 2025 · Bond path can be straight line or curve, obviously for the latter case the length of bond path is longer than the sum of the distances between BCP and associated two (3,-3) …
How may I calculate the bond length between two atoms?
Apr 26, 2021 · Bond formation could be something like 1-P break b r e a k. You could also run quantum calculations for all possible pairs (or higher order clusters) of atoms or hit the …
Bond length from infrared spectra? - Matter Modeling Stack …
Jul 26, 2020 · If you know the bond lengths of few such compounds, you can derive a very accurate linear correlation between the bond length and the frequency. So while you can't …
Lost atoms in LAMMPS - Matter Modeling Stack Exchange
Nov 1, 2022 · HI @Magic_Number, after running with more recorded timestep, I think the main reason is because the molecule pass through zlo and have atom deleted, as result, the bond …
How may I estimate the bond energy of a molecule?
Feb 20, 2025 · Can I estimate the bond energy by running a single Gaussian calculation of the fragments at very long separation (say, 40 angstroms)? Or do I have to calculate each …
Number of hydrogen bonds - Matter Modeling Stack Exchange
Aug 26, 2024 · I'm studying hydrogen bonds in a water system. The commonly accepted parameters are: D-A distance = 3.5 Å and H-D-A angle = 30°. To analyze the hydrogen bonds, …
How to carry out BSSE correction in ORCA?
Jan 22, 2025 · 2 I'm working on a diatomic molecule and need to accurately describe its bond dissociation energy. I plan to perform BSSE correction (Counterpoise or some other) for this …
density functional theory - How to calculate homolytic bond ...
May 25, 2020 · An experimental colleague asked me how hard it would be to calculate homolytic bond-dissociation energies for different phosphonates which are involved in a …
aimd - How to calculate constraint force for angle constraint in …
May 9, 2023 · In my previous simulations, I used a bond constraint between two atoms, and it was easy to obtain the constraint force by multiplying the output Lagrange multiplier with the …
Unrestricted Hartree-Fock : Density matrices initialization
Oct 15, 2023 · I have some results about the energy of H2 as a function of the bond length using Restricted HF (RHF) and Unrestricted HF (UHF) methods. With a zero-initialization of the …